Article

Cuahtecontzi Delint, Rosalia and Ishak, Mohd I. and Tsimbouri, Penelope M. and Jayawarna, Vineetha and Burgess, Karl V.E. and Ramage, Gordon and Nobbs, Angela H. and Damiati, Laila and Salmeron-Sanchez, Manuel and Su, Bo and Dalby, Matthew (2024) Nanotopography influences host-pathogen quorum sensing and facilitates selection of bioactive metabolites in mesenchymal stromal cells and pseudomonas aeruginosa co-cultures. ACS Applied Materials and Interfaces, 16 (33). pp. 43374-43386. ISSN 1944-8244

Hargrave, Kerrie E. and Worrell, Julie C. and Pirillo, Chiara and Brennan, Euan and Masdefiol Garriga, Andreu and Gray, Joshua I. and Purnell, Thomas and Roberts, Edward W. and MacLeod, Megan K.L. (2024) Lung influenza virus specific memory CD4 T cell location and optimal cytokine production are dependent on interactions with lung antigen-presenting cells. Mucosal Immunology, 17 (5). pp. 843-857. ISSN 1933-0219

Heggie, Robert and Jaiswal, Nishant and McCartney, Elaine and Moss, Jon and Menne, Tobias and Jones, Brian and Boyd, Kathleen and Soulis, Eileen and Hawkins, Neil and Wu, Olivia (2024) Central venous access devices for the delivery of systemic anticancer therapy: an economic evaluation. Value in Health, 27 (1). pp. 7-14. ISSN 1098-3015

Kumar, Saumya and Basto, Afonso P. and Ribeiro, Filipa and Almeida, Silvia C.P. and Campos, Patricia and Peres, Carina and Pulvirenti, Nadia and Al-Khalidi, Sarwah and Kilbey, Anna and Tosello, Jimena and Piaggio, Eliane and Russo, Momtchilo and Gama-Carvalho, Margarida and Coffelt, Seth B. and Roberts, Ed W. and Geginat, Jens and Florindo, Helena F. and Graca, Luis (2024) Specialized Tfh cell subsets driving type-1 and type-21 humoral responses in lymphoid tissue. Cell Discovery, 10: 64. ISSN 2056-5968

Lamb, Kieran D. and Hughes, Joseph and Lytras, Spyros and Young, Francesca and Koci, Orges and Herzig, James and Lovell, Simon C, and Grove, Joe and Yuan, Ke and Robertson, David L. (2024) From a single sequence to evolutionary trajectories: protein language models capture the evolutionary potential of SARS-CoV-2 protein sequences. bioRxiv.

Liu, Dan and Young, Francesca and Lamb, Kieran D. and Claudio Quiros, Adalberto and Pancheva, Alexandrina and Miller, Crispin and Macdonald, Craig and Robertson, David L. and Yuan, Ke (2024) PLM-interact: extending protein language models to predict protein-protein interactions. bioRxiv.

MacDonald, Lucy and Elmesmari, Aziza and Somma, Domenico and Frew, Jack and Di Mario, Clara and Madhu, Roopa and Paoletti, Audrey and Simakou, Theodoros and Hardy, Olympia M. and Tolusso, Barbara and Campobasso, Denise and Perniola, Simone and Gessi, Marco and Gigante, Maria Rita and Petricca, Luca and Bruno, Dario and Coletto, Lavinia Agra and Benvenuto, Roberta and Isaacs, John D. and Filby, Andrew and McDonald, David and Sim, Jasmine P.X. and Jamieson, Nigel and Wei, Kevin and D’Agostino, Maria Antonietta and Millar, Neal L. and Milling, Simon and McSharry, Charles and Gremese, Elisa and Affleck, Karen and Baker, Kenneth F. and McInnes, Iain B. and Otto, Thomas D. and Korsunsky, Ilya and Alivernini, Stefano and Kurowska-Stolarska, Mariola (2024) Synovial tissue myeloid dendritic cell subsets exhibit distinct tissue-niche localization and function in health and rheumatoid arthritis. Immunity, 57 (12). 2843-2862.e12. ISSN 1074-7613

Milling, Simon and Ijaz, Umer Zeeshan and Venieri, Danae and Christidis, George E. and Rattray, Nicholas J. W. and Gounaki, Iosifina and Andrusaite, Anna and Hareendran, Aravind and Knapp, Charles W. and Jones, Alexander X. and Photos-Jones, Effie (2024) Beneficial modulation of the gut microbiome by leachates of Penicillium purpurogenum in the presence of clays: A model for the preparation and efficacy of historical Lemnian Earth. PLoS ONE, 19 (12): e0313090. ISSN 1932-6203

Morrow, Andrew J. and Sykes, Robert and Saleh, Merna and Zahra, Baryab and MacIntosh, Alasdair and Kamdar, Anna and Bagot, Catherine and Bayes, Hannah K. and Blyth, Kevin G. and Bulluck, Heerajnarain and Carrick, David and Church, Colin and Corcoran, David and Findlay, Iain and Gibson, Vivienne and Gillespie, Lynsey and Grieve, Douglas and Hall Barrientos, Pauline and Ho, Antonia and Lang, Ninian N. and Lowe, David J. and Lennie, Vera and Macfarlane, Peter W. and Mayne, Kaitlin J. and Mark, Patrick B. and McConnachie, Alex and McGeoch, Ross and Nordin, Sabrina and Payne, Alexander and Rankin, Alastair J. and Robertson, Keith and Ryan, Nicola and Roditi, Giles and Sattar, Naveed and Stobo, David and Allwood-Spiers, Sarah and Touyz, Rhian M. and Veldtman, Gruschen and Weeden, Sarah and Weir, Robin and Watkins, Stuart and Welsh, Paul and Mangion, Kenneth and Berry, Colin (2024) Socioeconomic deprivation and illness trajectory in the Scottish population after COVID-19 hospitalization. Communications Medicine, 4: 32. ISSN 2730-664X

Nair, Reshmi and Lannagan, Tamsin R.M. and Jackstadt, Rene and Andrusaite, Anna and Cole, John and Boyne, Caitlin and Nibbs, Robert J.B. and Sansom, Owen J. and Milling, Simon (2024) Co-inhibition of TGF-β and PD-L1 pathways in a metastatic colorectal cancer mouse model triggers interferon responses, innate cells and T cells, alongside metabolic changes and tumor resistance. OncoImmunology, 13 (1): 2330194. ISSN 2162-4011

Nichols, Ben and Briola, Anny and Logan, Michael and Havlik, Jaroslav and Mascellani, Anna and Gkikas, Konstantinos and Milling, Simon and Ijaz, Umer Zeeshan and Quince, Christopher and Svolos, Vaios and Russell, Richard K. and Hansen, Richard and Gerasimidis, Konstantinos (2024) Gut metabolome and microbiota signatures predict response to treatment with exclusive enteral nutrition in a prospective study in children with active Crohn’s disease. American Journal of Clinical Nutrition, 119 (4). pp. 885-895. ISSN 0002-9165

Santi, Alice and Kay, Emily J. and Neilson, Lisa J. and McGarry, Lynn and Lilla, Sergio and Mullin, Margaret and Paul, Nikki R. and Fercoq, Frederic and Koulouras, Grigorios and Rodriguez Blanco, Giovanny and Athineos, Dimitris and Mason, Susan and Hughes, Mark and Thomson, Gemma and Kieffer, Yann and Nixon, Colin and Blyth, Karen and Mechta-Grigoriou, Fatima and Carlin, Leo M. and Zanivan, Sara (2024) Cancer-associated fibroblasts produce matrix-bound vesicles that influence endothelial cell function. Science Signaling, 17 (827): eade0580. ISSN 1945-0877